Contact
Location
Old Medical School Room 3836A
PO Box 800717
Charlottesville, VA 22908
Google Scholar Civelek Laboratory

About

Mete Civelek uses big data analytics to understand the molecular pathways of disease and develops personalized medicine approaches to cardiovascular and metabolic disorders. He is an assistant professor of Biomedical Engineering and a resident faculty at the Center for Public Health Genomics at the University of Virginia. After completing his postdoctoral fellowship in cardiovascular genetics in the laboratory of Jake Lusis at the University of California, Los Angeles, he joined UVA faculty in 2016.

His laboratory studies the complex interactions among genes and environment that increase our risk for heart disease and type 2 diabetes. Although diet, physical activity, and smoking affect our disease risk our genetic makeup play an equally important role. In the last ten years we learnt more about the genes that affect our disease risk than the previous 50 years thanks to technological advances in genome sequencing. But for majority of the genes we still do not know how they affect the development of heart disease or type 2 diabetes. His laboratory takes a holistic approach by carefully studying various human populations to connect the dots between genes and disease. They use data science, systems biology, and traditional molecular biology approaches to discover novel disease pathways in human cells and in mice. Their ultimate goal is to develop new therapies customized to individual heart disease or type 2 diabetes patients.

Dr. Civelek is the recipient of the NIH Pathway to Independence Award from the National Heart, Lung, and Blood Institute as well as Ralph E. Powe Junior Faculty Enhancement Award from Oak Ridge Associated Universities.

Education

B.S. Bogazici University, 1998

M.S. The Pennsylvania State University, 2000

Ph.D. University of Pennsylvania, 2009

Post-Doc University of California, Los Angeles, 2015

We study how the genes we inherit from our parents affect heart disease and type 2 diabetes risk with a goal of developing new therapies customized to the individual.

METE CIVELEK

Research Interests

Cardiovascular Bioengineering
Systems Biology
Predictive Modeling for Health
Genetics and Genomics
Bioinformatics and Computational Biology

Selected Publications

Predicting mechanisms of action at genetic loci associated with discordant effects on type 2 diabetes and abdominal fat accumulation. eLife 2023 Jun 16;12:e79834 ABERRA YT, MA L, BJÖRKEGREN JLM, CIVELEK M.
ABS
Network preservation analysis reveals dysregulated metabolic pathways in human vascular smooth muscle cell phenotypic switching. Circ: Genom Precis Med 2023 Jun 30:e003781 PERRY RN, ALBARRACIN D, AHERRAHROU R, CIVELEK M.
ABS
Genetic Regulation of SMC Gene Expression and Splicing Predict Causal CAD Genes. Circ Res. 2023 Feb 3;132(3):323-338. AHERRAHROU R, LUE D, PERRY RN, ABERRA YT, KHAN MD, SOH JY, ÖRD T, SINGHA P, YANG Q, GILANI H, BENAVENTE ED, WONG D, HINKLE J, MA L, SHEYNKMAN GM, DEN RUIJTER HM, MILLER CL, BJÖRKEGREN JLM, KAIKKONEN MU, CIVELEK M.
ABS
Adipocyte-specific modulation of KLF14 expression in mice leads to sex-dependent impacts in adiposity and lipid metabolism. Diabetes 2022 Apr 1;71(4):677-693. YANG Q, HINKLE J, REED JN, AHERRAHROU R, XU Z, HARRIS TE, STEPHENSON EJ, MUSUNURU K, KELLER SR, CIVELEK M.
ABS
Genetic regulation of atherosclerosis-relevant phenotypes in human vascular smooth muscle cells. Circ. Res., 2020;127(12):1552-1565. AHERRAHROU R, GUO L, NAGRAJ VP, AGUHOB A, HINKLE J, CHEN L, SOH JY, LUE D, ALENCAR GF, BOLTJES A, VAN DER LAAN SW, FARBER E, FULLER D, ANANE-WAE R, AKINGBESOTE N, MANICHAIKUL AW, MA L, KAIKKONEN MU, BJORKEGREN JLM, ONENGUT-GUMUSCU S, PASTERKAMP G, MILLER
ABS
Sex differences in human adipose tissue gene expression and genetic regulation involve adipogenesis. Genome Research. 2020; 10:1379-1392. ANDERSON WD, SOH JY, INNIS SE, DIMANCHE A, MA L, LANGEFELD CD, COMEAU ME, DAS SK, SCHADT EE, BJORKEGREN JLM, CIVELEK M.
ABS

Courses Taught

BME 4350 BME Data Science

Awards

UVA Shannon Center Mid-Career Fellow 2023
Fellow of the American Heart Association 2021
American Heart Association Council on Arteriosclerosis, Thrombosis and Vascular Biology Diversity and Inclusion Leadership Recognition Award 2020
American Heart Association Council on Arteriosclerosis, Thrombosis and Vascular Biology Diversity and Inclusion Leadership Recognition Award 2018
Ralph E. Powe Junior Faculty Enhancement Award 2016
NIH Pathway to Independence 2014
ASHG/Charles J. Epstein Trainee Award for Excellence in Human Genetics Research 2014
George Popjak Award for Outstanding Contributions to Atherosclerosis Research 2013
Prof. Dr. Turgut Noyan Award – Boğaziçi University Dept. of Chemical Engineering 1998

Featured Grants & Projects

Leducq Foundation Global Network of Excellence AtheroGEN: Identification and targeting of sex-specific mechanisms of atherosclerosis
NIH R01HL156120 Systems Genetics of Vascular Smooth Muscle Cell Phenotypes
NIH R01DK118287 The Role of Adipocyte KLF14 in Metabolic Syndrome
UVA Coulter Design and optimization of particle-based therapeutics for modulating adipocyte signaling in obesity
UVA iPRIME Impact of sodium-glucose cotransporter 2 inhibitors on systemic inflammation in women with coronary microvascular disease
Howard Hughes Medical Institute Transforming STEM Learning Environments: Collective Action for a Shared Future